Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Upk3aQ9JKX8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm23949-201ENSMUST00000104027 127 ntBASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm8343-201ENSMUST00000182705 994 ntBASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm17827-201ENSMUST00000211825 742 ntBASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Gm5705-201ENSMUST00000066241 711 ntBASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Upk3aQ9JKX8 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Cog3-203ENSMUST00000227473 4197 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm12380-201ENSMUST00000119012 544 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm9192-201ENSMUST00000183221 985 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Upk3aQ9JKX8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms