Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Tmem184b-205ENSMUST00000228002 3315 ntBASIC10.83□□□□□ -0.68
Trem1Q9JKE2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm24513-201ENSMUST00000174964 138 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm27397-201ENSMUST00000184997 107 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gm17837-201ENSMUST00000186435 985 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trem1Q9JKE2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm6447-201ENSMUST00000118905 835 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm14767-201ENSMUST00000121559 586 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm15376-201ENSMUST00000122258 783 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm27680-201ENSMUST00000184192 160 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm43094-201ENSMUST00000196549 921 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trem1Q9JKE2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms