Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm12384-201ENSMUST00000119228 919 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm10478-201ENSMUST00000084451 396 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm14660-201ENSMUST00000119809 575 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm26226-201ENSMUST00000082509 116 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim39Q9ESN2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim39Q9ESN2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms