Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Otud1Q9CUB6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.55□□□□□ -0.56
Otud1Q9CUB6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Otud1Q9CUB6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Otud1Q9CUB6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.55□□□□□ -0.56
Otud1Q9CUB6 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Otud1Q9CUB6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Otud1Q9CUB6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm23200-201ENSMUST00000104379 132 ntBASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm37533-201ENSMUST00000193848 545 ntBASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm44146-201ENSMUST00000203508 816 ntBASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.54□□□□□ -0.56
Otud1Q9CUB6 CT009713.1-201ENSMUST00000224828 853 ntBASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Otud1Q9CUB6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Cog3-203ENSMUST00000227473 4197 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Gm12380-201ENSMUST00000119012 544 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Gm5656-201ENSMUST00000171020 1096 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Mir6927-201ENSMUST00000184494 71 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Gm37709-201ENSMUST00000195074 600 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.53□□□□□ -0.56
Otud1Q9CUB6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Otud1Q9CUB6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms