Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm8177-201ENSMUST00000181591 1336 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm13678-201ENSMUST00000118926 340 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm15103-201ENSMUST00000119893 871 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm12696-201ENSMUST00000122361 905 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm20482-202ENSMUST00000174729 825 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Mospd4-201ENSMUST00000180618 576 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm27005-201ENSMUST00000182783 921 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm18304-201ENSMUST00000189162 546 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm37489-201ENSMUST00000191883 159 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm10608-202ENSMUST00000213924 676 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retreg3Q9CQV4 Gm44090-201ENSMUST00000204669 1834 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm11834-201ENSMUST00000122257 585 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm6140-201ENSMUST00000192494 966 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm21769-201ENSMUST00000211922 111 ntBASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC12.55□□□□□ -0.4
Retreg3Q9CQV4 Gm7046-201ENSMUST00000221351 977 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms