Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm17889-201ENSMUST00000198410 598 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm27530-201ENSMUST00000184096 98 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Ginm1-202ENSMUST00000065124 300 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Prpf8Q99PV0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Gm11511-201ENSMUST00000118146 540 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Mir7677-201ENSMUST00000184226 67 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Gm26286-201ENSMUST00000104166 134 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Prpf8Q99PV0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms