Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm14028-201ENSMUST00000117434 479 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Rprl1-201ENSMUST00000158050 327 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm29615-201ENSMUST00000185371 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28224-201ENSMUST00000186078 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm29001-201ENSMUST00000186177 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28292-201ENSMUST00000186593 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28101-201ENSMUST00000187608 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm4034-201ENSMUST00000187674 480 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm29076-201ENSMUST00000187689 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28302-201ENSMUST00000187931 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28646-201ENSMUST00000188220 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28205-201ENSMUST00000189177 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm29032-201ENSMUST00000189797 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm28695-201ENSMUST00000190300 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm37448-201ENSMUST00000192795 697 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.47□□□□□ -0.41
Gtf2ird2Q99NI3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gtf2ird2Q99NI3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gtf2ird2Q99NI3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Gm14208-201ENSMUST00000119645 678 ntBASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.45□□□□□ -0.42
Gtf2ird2Q99NI3 Gm24749-201ENSMUST00000157838 343 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms