Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cstf3Q99LI7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Gm25043-201ENSMUST00000158604 212 ntBASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Mospd4-201ENSMUST00000180618 576 ntBASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Gm28882-201ENSMUST00000185504 314 ntBASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cstf3Q99LI7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Cstf3Q99LI7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm5187-201ENSMUST00000117317 991 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm38002-201ENSMUST00000193255 180 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm38158-201ENSMUST00000194617 339 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm18062-201ENSMUST00000208020 547 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm18055-201ENSMUST00000208254 547 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cstf3Q99LI7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms