Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RtcbQ99LF4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gm45113-201ENSMUST00000207518 165 ntBASIC14.88□□□□□ -0.03
RtcbQ99LF4 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.88□□□□□ -0.03
RtcbQ99LF4 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RtcbQ99LF4 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm13549-201ENSMUST00000118339 796 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm12030-201ENSMUST00000121917 223 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm4862-201ENSMUST00000170405 438 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm9136-201ENSMUST00000193368 454 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm7902-201ENSMUST00000198842 947 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm43778-201ENSMUST00000199438 199 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm8574-201ENSMUST00000203207 924 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.87□□□□□ -0.03
RtcbQ99LF4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RtcbQ99LF4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Grk6-205ENSMUST00000224653 2976 ntBASIC14.86□□□□□ -0.03
RtcbQ99LF4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RtcbQ99LF4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms