Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Clip1Q922J3 Mir6958-201ENSMUST00000184207 73 ntBASIC18.84■□□□□ 0.61
Clip1Q922J3 Gm28388-201ENSMUST00000186262 437 ntBASIC18.84■□□□□ 0.61
Clip1Q922J3 CT485606.1-201ENSMUST00000213187 878 ntBASIC18.84■□□□□ 0.61
Clip1Q922J3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC18.84■□□□□ 0.61
Clip1Q922J3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Clip1Q922J3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC18.84■□□□□ 0.61
Clip1Q922J3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clip1Q922J3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clip1Q922J3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clip1Q922J3 Gm12419-201ENSMUST00000116649 636 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 Mir1956-201ENSMUST00000157748 65 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clip1Q922J3 Gm3551-201ENSMUST00000190750 664 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 Gm6450-201ENSMUST00000200896 574 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC18.83■□□□□ 0.61
Clip1Q922J3 Gm44421-201ENSMUST00000205064 1221 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clip1Q922J3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC18.83■□□□□ 0.61
Clip1Q922J3 Gm7940-201ENSMUST00000218195 769 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC18.83■□□□□ 0.61
Clip1Q922J3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Clip1Q922J3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clip1Q922J3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clip1Q922J3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Clip1Q922J3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Clip1Q922J3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Clip1Q922J3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC18.83■□□□□ 0.6
Clip1Q922J3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clip1Q922J3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Gm1848-201ENSMUST00000120711 789 ntBASIC18.82■□□□□ 0.6
Clip1Q922J3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Gm18159-201ENSMUST00000174516 1070 ntBASIC18.82■□□□□ 0.6
Clip1Q922J3 AC165260.2-203ENSMUST00000224237 336 ntBASIC18.82■□□□□ 0.6
Clip1Q922J3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Gm44152-201ENSMUST00000205007 1691 ntBASIC18.82■□□□□ 0.6
Clip1Q922J3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC18.82■□□□□ 0.6
Clip1Q922J3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Clip1Q922J3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clip1Q922J3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm6108-201ENSMUST00000208365 367 ntBASIC18.81■□□□□ 0.6
Clip1Q922J3 AC122350.1-201ENSMUST00000228135 533 ntBASIC18.81■□□□□ 0.6
Clip1Q922J3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Map1b-203ENSMUST00000223725 2669 ntBASIC18.81■□□□□ 0.6
Clip1Q922J3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm13384-201ENSMUST00000117166 1344 ntBASIC18.81■□□□□ 0.6
Clip1Q922J3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Clip1Q922J3 Gm11783-201ENSMUST00000119549 885 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms