Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb1Q91Y08 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm6963-201ENSMUST00000147879 379 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm5070-201ENSMUST00000177599 862 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm27046-201ENSMUST00000182160 463 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm38241-201ENSMUST00000192641 898 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm43179-201ENSMUST00000198797 275 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhb1Q91Y08 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm5419-201ENSMUST00000119301 527 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdhb1Q91Y08 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms