Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb2Q91Y00 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb2Q91Y00 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Pcdhb2Q91Y00 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb2Q91Y00 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb2Q91Y00 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm2260-201ENSMUST00000184965 657 ntBASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm8913-201ENSMUST00000209491 641 ntBASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm5363-201ENSMUST00000211927 938 ntBASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb2Q91Y00 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb2Q91Y00 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb2Q91Y00 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms