Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.84□□□□□ -0.67
Pcdhga3Q91XY5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Pcdhga3Q91XY5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm12058-201ENSMUST00000118614 437 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm13342-201ENSMUST00000121055 207 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Mospd4-201ENSMUST00000180618 576 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm27243-201ENSMUST00000183964 521 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm10076-201ENSMUST00000073238 384 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Pcdhga3Q91XY5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm13316-201ENSMUST00000140537 691 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm18304-201ENSMUST00000189162 546 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pcdhga3Q91XY5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms