Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm38294-201ENSMUST00000192831 381 ntBASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Gm28581-201ENSMUST00000186086 2177 ntBASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc9Q8VC31 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Gm5703-201ENSMUST00000186658 3973 ntBASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc9Q8VC31 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Gm13437-201ENSMUST00000122434 1981 ntBASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc9Q8VC31 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms