Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.13□□□□□ -0.47
Vps39Q8R5L3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm22018-201ENSMUST00000104357 131 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm43133-201ENSMUST00000197472 463 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps39Q8R5L3 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm25043-201ENSMUST00000158604 212 ntBASIC12.11□□□□□ -0.47
Vps39Q8R5L3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.11□□□□□ -0.47
Vps39Q8R5L3 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps39Q8R5L3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps39Q8R5L3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms