Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm8737-201ENSMUST00000122208 642 ntBASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm8194-201ENSMUST00000159783 859 ntBASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Snora73b-201ENSMUST00000083419 205 ntBASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Cog3-203ENSMUST00000227473 4197 ntBASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.45■□□□□ 0.06
Chmp7Q8R1T1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm23045-201ENSMUST00000175041 96 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm23771-201ENSMUST00000178702 110 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm17931-201ENSMUST00000208132 634 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.44■□□□□ 0.06
Chmp7Q8R1T1 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm43447-201ENSMUST00000198471 1535 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 n-R5s64-201ENSMUST00000102019 119 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm22920-201ENSMUST00000102175 109 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm14193-201ENSMUST00000105067 153 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm27910-201ENSMUST00000185004 107 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm38117-201ENSMUST00000194653 939 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm43186-201ENSMUST00000198130 824 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chmp7Q8R1T1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms