Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Gm4271-201ENSMUST00000174444 973 ntBASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Gm6244-201ENSMUST00000178732 841 ntBASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nudcd3Q8R1N4 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm24830-201ENSMUST00000102024 166 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm11918-201ENSMUST00000121660 179 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Mir1894-201ENSMUST00000122802 81 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm7029-201ENSMUST00000173226 450 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm8652-201ENSMUST00000181363 964 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm45384-201ENSMUST00000210451 277 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm26232-201ENSMUST00000083360 166 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nudcd3Q8R1N4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd3Q8R1N4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms