Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm5276-201ENSMUST00000196683 1047 ntBASIC11□□□□□ -0.65
Ebf4Q8K4J2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm9544-201ENSMUST00000223349 2482 ntBASIC11□□□□□ -0.65
Ebf4Q8K4J2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Gm13127-201ENSMUST00000118978 1389 ntBASIC11□□□□□ -0.65
Ebf4Q8K4J2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ebf4Q8K4J2 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm9083-201ENSMUST00000120423 819 ntBASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm27838-201ENSMUST00000184829 128 ntBASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm18473-201ENSMUST00000220543 868 ntBASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ebf4Q8K4J2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm11439-201ENSMUST00000118598 409 ntBASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Ebf4Q8K4J2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms