Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Gm11980-201ENSMUST00000121445 986 ntBASIC13.65□□□□□ -0.22
Syne4Q8CII8 Gm7150-201ENSMUST00000122032 981 ntBASIC13.65□□□□□ -0.22
Syne4Q8CII8 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Gm25201-201ENSMUST00000083093 170 ntBASIC13.65□□□□□ -0.22
Syne4Q8CII8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.65□□□□□ -0.22
Syne4Q8CII8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Syne4Q8CII8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Syne4Q8CII8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Grk6-205ENSMUST00000224653 2976 ntBASIC13.64□□□□□ -0.23
Syne4Q8CII8 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm12990-201ENSMUST00000120372 468 ntBASIC13.64□□□□□ -0.23
Syne4Q8CII8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm5706-201ENSMUST00000181525 993 ntBASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm4034-201ENSMUST00000187674 480 ntBASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.64□□□□□ -0.23
Syne4Q8CII8 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.64□□□□□ -0.23
Syne4Q8CII8 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Syne4Q8CII8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm37981-201ENSMUST00000194280 535 ntBASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm6108-201ENSMUST00000208365 367 ntBASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm35713-201ENSMUST00000210516 199 ntBASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Syne4Q8CII8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms