Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CopaQ8CIE6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CopaQ8CIE6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CopaQ8CIE6 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.4□□□□□ -0.43
CopaQ8CIE6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CopaQ8CIE6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CopaQ8CIE6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Map1b-203ENSMUST00000223725 2669 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm13665-201ENSMUST00000120830 528 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Mir5132-201ENSMUST00000175166 71 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm2260-201ENSMUST00000184965 657 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.39□□□□□ -0.43
CopaQ8CIE6 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CopaQ8CIE6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Gm14130-201ENSMUST00000118417 987 ntBASIC12.38□□□□□ -0.43
CopaQ8CIE6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Gm35960-201ENSMUST00000202712 767 ntBASIC12.38□□□□□ -0.43
CopaQ8CIE6 Rps4l-202ENSMUST00000204242 789 ntBASIC12.38□□□□□ -0.43
CopaQ8CIE6 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.38□□□□□ -0.43
CopaQ8CIE6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
CopaQ8CIE6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CopaQ8CIE6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.37□□□□□ -0.43
CopaQ8CIE6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CopaQ8CIE6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms