Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc87Q8CDL9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm9083-201ENSMUST00000120423 819 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm7809-201ENSMUST00000153199 742 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm18304-201ENSMUST00000189162 546 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gm43133-201ENSMUST00000197472 463 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc87Q8CDL9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc87Q8CDL9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc87Q8CDL9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms