Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm4862-201ENSMUST00000170405 438 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col6a6Q8C6K9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm6722-201ENSMUST00000221586 390 ntBASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Gm1848-201ENSMUST00000120711 789 ntBASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col6a6Q8C6K9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a6Q8C6K9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms