Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.42□□□□□ -0.58
Ska3Q8C263 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Ska3Q8C263 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ska3Q8C263 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm6963-201ENSMUST00000147879 379 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm5070-201ENSMUST00000177599 862 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.41□□□□□ -0.58
Ska3Q8C263 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ska3Q8C263 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.4□□□□□ -0.58
Ska3Q8C263 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ska3Q8C263 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ska3Q8C263 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms