Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gm11222-201ENSMUST00000119005 738 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gm13315-201ENSMUST00000120376 991 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gm11597-201ENSMUST00000121423 964 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gm25043-201ENSMUST00000158604 212 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gm27243-201ENSMUST00000183964 521 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpsf4Q8BQZ5 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Gm23270-201ENSMUST00000104055 131 ntBASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Gm39404-201ENSMUST00000216350 313 ntBASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpsf4Q8BQZ5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm14726-201ENSMUST00000120623 896 ntBASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4Q8BQZ5 Gm14381-201ENSMUST00000122105 414 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms