Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm12341-201ENSMUST00000119724 503 ntBASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm14719-201ENSMUST00000121891 340 ntBASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm42612-201ENSMUST00000197986 623 ntBASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm43170-201ENSMUST00000199827 612 ntBASIC9.95□□□□□ -0.82
Smco3Q8BQM7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smco3Q8BQM7 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gm11618-201ENSMUST00000117946 267 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gm8099-201ENSMUST00000200510 742 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Smco3Q8BQM7 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms