Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm8885-201ENSMUST00000189382 598 ntBASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Gm9996-201ENSMUST00000070359 913 ntBASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sfr1Q8BP27 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.4□□□□□ -0.42
Sfr1Q8BP27 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Sfr1Q8BP27 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sfr1Q8BP27 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm12015-201ENSMUST00000117065 843 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm26083-201ENSMUST00000157904 193 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm17376-201ENSMUST00000166016 84 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm44124-201ENSMUST00000204159 472 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sfr1Q8BP27 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm24830-201ENSMUST00000102024 166 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm6082-201ENSMUST00000215204 454 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Gm26232-201ENSMUST00000083360 166 ntBASIC12.38□□□□□ -0.43
Sfr1Q8BP27 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms