Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nop53Q8BK35 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nop53Q8BK35 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.02□□□□□ -0.33
Nop53Q8BK35 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.02□□□□□ -0.33
Nop53Q8BK35 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm43118-201ENSMUST00000199149 775 ntBASIC13.02□□□□□ -0.33
Nop53Q8BK35 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.02□□□□□ -0.33
Nop53Q8BK35 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.02□□□□□ -0.33
Nop53Q8BK35 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nop53Q8BK35 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm25261-201ENSMUST00000157416 134 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm8738-201ENSMUST00000172606 329 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm25927-201ENSMUST00000175058 117 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm43179-201ENSMUST00000198797 275 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm35960-201ENSMUST00000202712 767 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm45880-201ENSMUST00000213041 853 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.01□□□□□ -0.33
Nop53Q8BK35 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nop53Q8BK35 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nop53Q8BK35 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nop53Q8BK35 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nop53Q8BK35 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nop53Q8BK35 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nop53Q8BK35 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nop53Q8BK35 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms