Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc40Q8BI79 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Ccdc40Q8BI79 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc40Q8BI79 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc40Q8BI79 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Gm13342-201ENSMUST00000121055 207 ntBASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Gm9022-201ENSMUST00000182482 992 ntBASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc40Q8BI79 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm6023-201ENSMUST00000118217 606 ntBASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm27023-201ENSMUST00000182372 285 ntBASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc40Q8BI79 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm10434-201ENSMUST00000101158 471 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Gm23931-201ENSMUST00000103842 109 ntBASIC12.68□□□□□ -0.38
Ccdc40Q8BI79 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms