Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm11930-201ENSMUST00000117788 190 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm15547-201ENSMUST00000122152 333 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm38317-201ENSMUST00000195564 343 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Depdc1bQ8BH88 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm14017-201ENSMUST00000121934 386 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Map1b-203ENSMUST00000223725 2669 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Depdc1bQ8BH88 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Depdc1bQ8BH88 Gm25043-201ENSMUST00000158604 212 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms