Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ctdp1Q7TSG2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.21□□□□□ -0.29
Ctdp1Q7TSG2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ctdp1Q7TSG2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm12363-201ENSMUST00000122250 668 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm8062-201ENSMUST00000139696 444 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm38092-201ENSMUST00000195600 653 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm24136-201ENSMUST00000083374 165 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm10478-201ENSMUST00000084451 396 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.2□□□□□ -0.3
Ctdp1Q7TSG2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm4768-201ENSMUST00000206199 686 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm19163-201ENSMUST00000223313 780 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Snora73a-201ENSMUST00000082453 205 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm24526-201ENSMUST00000082921 158 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ctdp1Q7TSG2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm5187-201ENSMUST00000117317 991 ntBASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Gm13392-201ENSMUST00000117708 150 ntBASIC13.18□□□□□ -0.3
Ctdp1Q7TSG2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms