Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SspnQ62147 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.18□□□□□ -0.78
SspnQ62147 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.18□□□□□ -0.78
SspnQ62147 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.18□□□□□ -0.78
SspnQ62147 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Gm16379-201ENSMUST00000161469 348 ntBASIC10.18□□□□□ -0.78
SspnQ62147 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Gm5745-201ENSMUST00000183748 313 ntBASIC10.18□□□□□ -0.78
SspnQ62147 Gm45784-201ENSMUST00000188360 142 ntBASIC10.18□□□□□ -0.78
SspnQ62147 Gm8762-201ENSMUST00000193486 339 ntBASIC10.18□□□□□ -0.78
SspnQ62147 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.18□□□□□ -0.78
SspnQ62147 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.18□□□□□ -0.78
SspnQ62147 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SspnQ62147 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.18□□□□□ -0.78
SspnQ62147 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SspnQ62147 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.18□□□□□ -0.78
SspnQ62147 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
SspnQ62147 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.17□□□□□ -0.78
SspnQ62147 Gm45930-201ENSMUST00000221330 292 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Gm24136-201ENSMUST00000083374 165 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.17□□□□□ -0.78
SspnQ62147 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
SspnQ62147 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SspnQ62147 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.17□□□□□ -0.78
SspnQ62147 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.16□□□□□ -0.78
SspnQ62147 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SspnQ62147 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SspnQ62147 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SspnQ62147 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.16□□□□□ -0.78
SspnQ62147 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SspnQ62147 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SspnQ62147 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SspnQ62147 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms