Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox17Q61473 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Sox17Q61473 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.31□□□□□ -0.6
Sox17Q61473 Gm7029-201ENSMUST00000173226 450 ntBASIC11.31□□□□□ -0.6
Sox17Q61473 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox17Q61473 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox17Q61473 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.31□□□□□ -0.6
Sox17Q61473 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.31□□□□□ -0.6
Sox17Q61473 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.31□□□□□ -0.6
Sox17Q61473 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox17Q61473 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox17Q61473 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox17Q61473 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.3□□□□□ -0.6
Sox17Q61473 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox17Q61473 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox17Q61473 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.3□□□□□ -0.6
Sox17Q61473 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.3□□□□□ -0.6
Sox17Q61473 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.3□□□□□ -0.6
Sox17Q61473 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox17Q61473 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox17Q61473 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.3□□□□□ -0.6
Sox17Q61473 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox17Q61473 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.3□□□□□ -0.6
Sox17Q61473 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox17Q61473 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox17Q61473 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox17Q61473 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox17Q61473 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox17Q61473 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sox17Q61473 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms