Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.59□□□□□ -0.39
Smarcd1Q61466 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gm18734-201ENSMUST00000172937 808 ntBASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.59□□□□□ -0.39
Smarcd1Q61466 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.59□□□□□ -0.39
Smarcd1Q61466 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smarcd1Q61466 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
Smarcd1Q61466 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Smarcd1Q61466 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm11509-201ENSMUST00000117358 325 ntBASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm12196-201ENSMUST00000120954 262 ntBASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm11660-201ENSMUST00000120955 412 ntBASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Gm3332-201ENSMUST00000189337 928 ntBASIC12.58□□□□□ -0.4
Smarcd1Q61466 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smarcd1Q61466 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm12501-201ENSMUST00000119163 529 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm12036-201ENSMUST00000120008 530 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Mir5120-201ENSMUST00000175020 78 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm21811-201ENSMUST00000096485 930 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.57□□□□□ -0.4
Smarcd1Q61466 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smarcd1Q61466 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms