Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Auts2-212ENSMUST00000178555 309 ntBASIC11.55□□□□□ -0.56
Nr1h4Q60641 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm5904-201ENSMUST00000210286 865 ntBASIC11.55□□□□□ -0.56
Nr1h4Q60641 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Nr1h4Q60641 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm43014-201ENSMUST00000198568 2443 ntBASIC11.55□□□□□ -0.56
Nr1h4Q60641 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nr1h4Q60641 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm12036-201ENSMUST00000120008 530 ntBASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm15806-201ENSMUST00000120696 955 ntBASIC11.54□□□□□ -0.56
Nr1h4Q60641 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.54□□□□□ -0.56
Nr1h4Q60641 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.54□□□□□ -0.56
Nr1h4Q60641 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.54□□□□□ -0.56
Nr1h4Q60641 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Nr1h4Q60641 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms