Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mir7677-201ENSMUST00000184226 67 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm5369-201ENSMUST00000217499 588 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm5455-201ENSMUST00000058710 715 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Shroom1Q5SX79 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Gm13611-201ENSMUST00000118269 318 ntBASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Gm13408-201ENSMUST00000119822 798 ntBASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Gm13935-201ENSMUST00000121859 798 ntBASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Gm37835-201ENSMUST00000193305 361 ntBASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Shroom1Q5SX79 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Gm23699-201ENSMUST00000158835 135 ntBASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.87□□□□□ -0.35
Shroom1Q5SX79 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Gm21811-201ENSMUST00000096485 930 ntBASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Shroom1Q5SX79 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms