Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav3-3Q5R1C3 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Trav3-3Q5R1C3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Spata33-207ENSMUST00000212760 4074 ntBASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm12485-201ENSMUST00000119641 291 ntBASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav3-3Q5R1C3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm23935-201ENSMUST00000102303 57 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm24270-201ENSMUST00000102326 57 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm24245-201ENSMUST00000157318 57 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms