Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm24830-201ENSMUST00000102024 166 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm11793-201ENSMUST00000120433 981 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm29396-201ENSMUST00000185659 716 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.96□□□□□ -0.49
Scn2bQ56A07 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Scn2bQ56A07 Gm26232-201ENSMUST00000083360 166 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.96□□□□□ -0.49
Scn2bQ56A07 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Scn2bQ56A07 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm38266-201ENSMUST00000194931 421 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.95□□□□□ -0.5
Scn2bQ56A07 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Scn2bQ56A07 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.94□□□□□ -0.5
Scn2bQ56A07 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Scn2bQ56A07 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms