Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Syne3Q4FZC9 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm15547-201ENSMUST00000122152 333 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm27320-201ENSMUST00000184892 109 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm28882-201ENSMUST00000185504 314 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm7783-201ENSMUST00000204795 781 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Syne3Q4FZC9 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Gm23119-201ENSMUST00000158610 140 ntBASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.85□□□□□ -0.35
Syne3Q4FZC9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.85□□□□□ -0.35
Syne3Q4FZC9 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Syne3Q4FZC9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Syne3Q4FZC9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms