Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm45118-201ENSMUST00000208928 825 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prpf38aQ4FK66 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm29100-201ENSMUST00000187564 4410 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm11663-201ENSMUST00000117888 290 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm13408-201ENSMUST00000119822 798 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm13935-201ENSMUST00000121859 798 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm5523-201ENSMUST00000180415 997 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Prpf38aQ4FK66 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Gm8199-201ENSMUST00000121323 823 ntBASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Gm22334-201ENSMUST00000158070 133 ntBASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Gm6905-201ENSMUST00000205729 511 ntBASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf38aQ4FK66 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms