Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Spg11Q3UHA3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Mir705-201ENSMUST00000102058 82 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm26976-201ENSMUST00000182929 908 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm24231-201ENSMUST00000104315 133 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm22344-201ENSMUST00000122642 278 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm16030-201ENSMUST00000159098 603 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm2594-201ENSMUST00000214774 742 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Spg11Q3UHA3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Spg11Q3UHA3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Spg11Q3UHA3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Gm8197-202ENSMUST00000193422 934 ntBASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms