Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Chd8Q09XV5 Gm14165-201ENSMUST00000121456 952 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm8464-202ENSMUST00000146697 1142 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm4750-201ENSMUST00000151942 1142 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Mir3100-201ENSMUST00000174918 65 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm5194-201ENSMUST00000221457 742 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 H2afy3-201ENSMUST00000151919 1112 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm45090-201ENSMUST00000208775 1148 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm23105-201ENSMUST00000083719 134 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.78□□□□□ -0.68
Chd8Q09XV5 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Chd8Q09XV5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Chd8Q09XV5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.77□□□□□ -0.69
Chd8Q09XV5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm23555-201ENSMUST00000157815 135 ntBASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm25872-201ENSMUST00000177784 100 ntBASIC10.77□□□□□ -0.69
Chd8Q09XV5 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Chd8Q09XV5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Chd8Q09XV5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.77□□□□□ -0.69
Chd8Q09XV5 Gm38348-201ENSMUST00000191718 2273 ntBASIC10.77□□□□□ -0.69
Chd8Q09XV5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms