Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Tff1Q08423 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm11597-201ENSMUST00000121423 964 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.08□□□□□ -0.8
Tff1Q08423 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.08□□□□□ -0.8
Tff1Q08423 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.08□□□□□ -0.8
Tff1Q08423 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Tff1Q08423 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Tff1Q08423 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.07□□□□□ -0.8
Tff1Q08423 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Tff1Q08423 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.07□□□□□ -0.8
Tff1Q08423 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm12502-201ENSMUST00000120197 444 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Gm12997-201ENSMUST00000120207 640 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Gm13786-201ENSMUST00000122371 333 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.07□□□□□ -0.8
Tff1Q08423 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm25668-201ENSMUST00000157700 129 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm27390-201ENSMUST00000184516 176 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Gm6621-201ENSMUST00000193251 772 ntBASIC10.07□□□□□ -0.8
Tff1Q08423 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Tff1Q08423 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.07□□□□□ -0.8
Tff1Q08423 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Tff1Q08423 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms