Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox9Q04887 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Sox9Q04887 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox9Q04887 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox9Q04887 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox9Q04887 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox9Q04887 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.52□□□□□ -0.4
Sox9Q04887 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox9Q04887 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox9Q04887 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.52□□□□□ -0.4
Sox9Q04887 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm24231-201ENSMUST00000104315 133 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Gm14807-201ENSMUST00000116640 983 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm26134-201ENSMUST00000178484 110 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sox9Q04887 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sox9Q04887 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Grk6-205ENSMUST00000224653 2976 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.52□□□□□ -0.41
Sox9Q04887 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox9Q04887 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox9Q04887 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sox9Q04887 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.51□□□□□ -0.41
Sox9Q04887 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox9Q04887 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox9Q04887 Gm25766-201ENSMUST00000104101 131 ntBASIC12.51□□□□□ -0.41
Sox9Q04887 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Gm22711-201ENSMUST00000116890 133 ntBASIC12.51□□□□□ -0.41
Sox9Q04887 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sox9Q04887 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
Sox9Q04887 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox9Q04887 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Trav11n-201ENSMUST00000200113 343 ntBASIC12.51□□□□□ -0.41
Sox9Q04887 Gm43852-201ENSMUST00000202098 917 ntBASIC12.51□□□□□ -0.41
Sox9Q04887 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.51□□□□□ -0.41
Sox9Q04887 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox9Q04887 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox9Q04887 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox9Q04887 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox9Q04887 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox9Q04887 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox9Q04887 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox9Q04887 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms