Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm13182-201ENSMUST00000122241 312 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Cacna1aP97445 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Mir6941-201ENSMUST00000184711 59 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm7722-201ENSMUST00000120646 741 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm4868-201ENSMUST00000164138 789 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm25998-201ENSMUST00000175397 53 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.19□□□□□ -0.62
Cacna1aP97445 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cacna1aP97445 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.19□□□□□ -0.62
Cacna1aP97445 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Rprl1-201ENSMUST00000158050 327 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm12579-201ENSMUST00000118040 783 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm12783-201ENSMUST00000121425 397 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.18□□□□□ -0.62
Cacna1aP97445 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm44158-201ENSMUST00000203881 505 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm45575-201ENSMUST00000210283 548 ntBASIC11.18□□□□□ -0.62
Cacna1aP97445 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cacna1aP97445 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cacna1aP97445 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms