Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nkx2-3P97334 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm14942-201ENSMUST00000119642 336 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm12990-201ENSMUST00000120372 468 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm7150-201ENSMUST00000122032 981 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm18159-201ENSMUST00000174516 1070 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm21156-201ENSMUST00000189693 869 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm8574-201ENSMUST00000203207 924 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.13■□□□□ 0.01
Nkx2-3P97334 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nkx2-3P97334 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nkx2-3P97334 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.11■□□□□ 0.01
Nkx2-3P97334 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Gm14441-201ENSMUST00000121960 540 ntBASIC15.11■□□□□ 0.01
Nkx2-3P97334 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.11■□□□□ 0.01
Nkx2-3P97334 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC15.11■□□□□ 0.01
Nkx2-3P97334 Gm29155-201ENSMUST00000185910 269 ntBASIC15.11■□□□□ 0.01
Nkx2-3P97334 Gm7593-201ENSMUST00000187246 644 ntBASIC15.11■□□□□ 0.01
Nkx2-3P97334 Gm2875-201ENSMUST00000211333 360 ntBASIC15.11■□□□□ 0.01
Nkx2-3P97334 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nkx2-3P97334 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms