Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SgcbP82349 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Gm15074-201ENSMUST00000117603 936 ntBASIC10.84□□□□□ -0.67
SgcbP82349 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
SgcbP82349 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SgcbP82349 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Gm4034-201ENSMUST00000187674 480 ntBASIC10.84□□□□□ -0.67
SgcbP82349 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.84□□□□□ -0.67
SgcbP82349 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
SgcbP82349 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcbP82349 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.84□□□□□ -0.67
SgcbP82349 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.84□□□□□ -0.67
SgcbP82349 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcbP82349 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
SgcbP82349 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
SgcbP82349 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
SgcbP82349 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.83□□□□□ -0.68
SgcbP82349 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
SgcbP82349 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcbP82349 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
SgcbP82349 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Gm14644-201ENSMUST00000116671 647 ntBASIC10.83□□□□□ -0.68
SgcbP82349 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.83□□□□□ -0.68
SgcbP82349 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.83□□□□□ -0.68
SgcbP82349 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcbP82349 Gm44262-201ENSMUST00000204969 372 ntBASIC10.83□□□□□ -0.68
SgcbP82349 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.83□□□□□ -0.68
SgcbP82349 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcbP82349 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
SgcbP82349 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcbP82349 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.83□□□□□ -0.68
SgcbP82349 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SgcbP82349 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.83□□□□□ -0.68
SgcbP82349 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
SgcbP82349 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.82□□□□□ -0.68
SgcbP82349 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
SgcbP82349 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.82□□□□□ -0.68
SgcbP82349 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SgcbP82349 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms