Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC16.23■□□□□ 0.19
Nphp4P59240 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Gm11244-201ENSMUST00000121243 237 ntBASIC16.23■□□□□ 0.19
Nphp4P59240 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Mir1956-201ENSMUST00000157748 65 ntBASIC16.23■□□□□ 0.19
Nphp4P59240 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Nphp4P59240 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC16.23■□□□□ 0.19
Nphp4P59240 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nphp4P59240 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Nphp4P59240 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nphp4P59240 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Nphp4P59240 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC16.23■□□□□ 0.19
Nphp4P59240 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Nphp4P59240 Gm15374-201ENSMUST00000119313 844 ntBASIC16.22■□□□□ 0.19
Nphp4P59240 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC16.22■□□□□ 0.19
Nphp4P59240 Gm5778-201ENSMUST00000171003 1072 ntBASIC16.22■□□□□ 0.19
Nphp4P59240 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Gm7504-201ENSMUST00000201449 424 ntBASIC16.22■□□□□ 0.19
Nphp4P59240 Gm17825-201ENSMUST00000206836 794 ntBASIC16.22■□□□□ 0.19
Nphp4P59240 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Nphp4P59240 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.22■□□□□ 0.19
Nphp4P59240 AC124433.1-201ENSMUST00000224483 1063 ntBASIC16.22■□□□□ 0.19
Nphp4P59240 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Gm17213-201ENSMUST00000165161 1360 ntBASIC16.22■□□□□ 0.19
Nphp4P59240 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.22■□□□□ 0.19
Nphp4P59240 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nphp4P59240 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nphp4P59240 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Nphp4P59240 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC16.21■□□□□ 0.19
Nphp4P59240 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC16.21■□□□□ 0.19
Nphp4P59240 Gm9089-201ENSMUST00000122027 526 ntBASIC16.21■□□□□ 0.19
Nphp4P59240 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC16.21■□□□□ 0.19
Nphp4P59240 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC16.21■□□□□ 0.19
Nphp4P59240 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC16.21■□□□□ 0.19
Nphp4P59240 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC16.21■□□□□ 0.19
Nphp4P59240 Gm43852-201ENSMUST00000202098 917 ntBASIC16.21■□□□□ 0.19
Nphp4P59240 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nphp4P59240 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC16.21■□□□□ 0.19
Nphp4P59240 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nphp4P59240 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nphp4P59240 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nphp4P59240 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nphp4P59240 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nphp4P59240 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nphp4P59240 Gm1848-201ENSMUST00000120711 789 ntBASIC16.2■□□□□ 0.18
Nphp4P59240 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC16.2■□□□□ 0.18
Nphp4P59240 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nphp4P59240 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Nphp4P59240 Gm20495-201ENSMUST00000173902 235 ntBASIC16.2■□□□□ 0.18
Nphp4P59240 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nphp4P59240 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nphp4P59240 Gm44315-201ENSMUST00000203041 219 ntBASIC16.2■□□□□ 0.18
Nphp4P59240 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nphp4P59240 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC16.2■□□□□ 0.18
Nphp4P59240 CT009546.1-201ENSMUST00000222573 1120 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms