Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Cldn18P56857 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cldn18P56857 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm12036-201ENSMUST00000120008 530 ntBASIC10.83□□□□□ -0.68
Cldn18P56857 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.83□□□□□ -0.68
Cldn18P56857 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm45186-201ENSMUST00000206874 478 ntBASIC10.83□□□□□ -0.68
Cldn18P56857 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.83□□□□□ -0.68
Cldn18P56857 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.83□□□□□ -0.68
Cldn18P56857 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cldn18P56857 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.83□□□□□ -0.68
Cldn18P56857 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.83□□□□□ -0.68
Cldn18P56857 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cldn18P56857 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.83□□□□□ -0.68
Cldn18P56857 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.82□□□□□ -0.68
Cldn18P56857 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Cldn18P56857 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Gm5616-201ENSMUST00000165252 384 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 Gm8741-201ENSMUST00000174736 384 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Gm37666-201ENSMUST00000194110 866 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 Gm45433-201ENSMUST00000209386 247 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.82□□□□□ -0.68
Cldn18P56857 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cldn18P56857 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.82□□□□□ -0.68
Cldn18P56857 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.82□□□□□ -0.68
Cldn18P56857 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cldn18P56857 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.81□□□□□ -0.68
Cldn18P56857 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cldn18P56857 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Cldn18P56857 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.81□□□□□ -0.68
Cldn18P56857 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.81□□□□□ -0.68
Cldn18P56857 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cldn18P56857 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.81□□□□□ -0.68
Cldn18P56857 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Cldn18P56857 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cldn18P56857 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms