Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atxn1P54254 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.06□□□□□ -0.48
Atxn1P54254 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.06□□□□□ -0.48
Atxn1P54254 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Atxn1P54254 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.06□□□□□ -0.48
Atxn1P54254 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Atxn1P54254 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Atxn1P54254 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atxn1P54254 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.05□□□□□ -0.48
Atxn1P54254 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm11451-201ENSMUST00000118946 630 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Gm12948-201ENSMUST00000119406 682 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Gm12516-201ENSMUST00000120819 385 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm22877-201ENSMUST00000175451 105 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Mir7677-201ENSMUST00000184226 67 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm43778-201ENSMUST00000199438 199 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm17827-201ENSMUST00000211825 742 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Gm19640-201ENSMUST00000214849 464 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Gm270-201ENSMUST00000223010 976 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.05□□□□□ -0.48
Atxn1P54254 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atxn1P54254 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.05□□□□□ -0.48
Atxn1P54254 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms