Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Gm12795-201ENSMUST00000117594 539 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Gm11340-201ENSMUST00000119226 412 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Gm12029-201ENSMUST00000120073 832 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.64□□□□□ -0.55
Sox3P53784 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Gm19353-201ENSMUST00000184561 445 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox3P53784 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.64□□□□□ -0.55
Sox3P53784 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.64□□□□□ -0.55
Sox3P53784 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.64□□□□□ -0.55
Sox3P53784 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox3P53784 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox3P53784 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Sox3P53784 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox3P53784 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Sox3P53784 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sox3P53784 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gm15432-201ENSMUST00000121106 195 ntBASIC11.63□□□□□ -0.55
Sox3P53784 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.63□□□□□ -0.55
Sox3P53784 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.63□□□□□ -0.55
Sox3P53784 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox3P53784 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Sox3P53784 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.63□□□□□ -0.55
Sox3P53784 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox3P53784 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox3P53784 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.63□□□□□ -0.55
Sox3P53784 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.63□□□□□ -0.55
Sox3P53784 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.63□□□□□ -0.55
Sox3P53784 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.63□□□□□ -0.55
Sox3P53784 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sox3P53784 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox3P53784 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sox3P53784 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox3P53784 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox3P53784 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox3P53784 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.62□□□□□ -0.55
Sox3P53784 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox3P53784 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.62□□□□□ -0.55
Sox3P53784 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.62□□□□□ -0.55
Sox3P53784 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox3P53784 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox3P53784 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Sox3P53784 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms